What is GATB ?

TheĀ Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes).

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GATB system offers to scientists a complete panel of ready-to-use software components, as follows:

gatb_core_componentsAt the heart of the system is GATB-Core, a set of new highly efficient algorithms relying on very compact data structures. Key features of GATB-based softwares are:

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Read more about : GATB core algorithms and GATB ready-to-use softwares.


The people and research institutes behind GATB.

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