A new GATB Programming Day is scheduled on October 24th, 2017 in Rennes, France. This event takes place to provide bioinformatics developers with the basics of GATB-Core library to design and create high-performance software to process and analyze sequencing reads data. Please, follow this link to get all details concerning…
The Kover software (k-mer based genomic biomarker discovery) now uses GATB for multi-sample k-mer counting. See a recent article on antimicrobial resistance from A. Drouin et al, https://arxiv.org/pdf/1612.01030v1.pdf.
BCALM 2 is a bioinformatics software for constructing the compacted de Bruijn graph of sequencing data. Publication: Compacting de Bruijn graphs from sequencing data quickly and in low memory Software: BCALM 2
GATB assembly pipeline entered the 1st CAMI Challenge (Critical Assessment of Metagenome Interpretation). Follow this link to read results evaluation