What is GATB ?

The Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes).

GATB system offers to scientists a complete panel of ready-to-use software components, as follows:

gatb_core_componentsAt the heart of the system is GATB-Core, a set of new highly efficient algorithms relying on very compact data structures. Key features of GATB-based softwares are:


Read more about : GATB core algorithms and GATB ready-to-use softwares.

The people and research institutes behind GATB.

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